This tutorial series is created using CellDesigner 4.3 Ubuntu 14.04. CellDesigner is a process diagram editor for drawing gene-regulatory and biochemical networks. Intuitive user-interface helps to draw a diagram in rich graphical representation with our own design. Networks are drawn based on the process diagram, with graphical notation system proposed by Kitano. CellDesigner is used for User-friendly visualization Modeling and simulation of genetic regulatory networks Protein networks and metabolic networks. Read more
Foss : CellDesigner - English
Outline: CellDesigner series- based on version 4.3 Startup guide for first-time users of CellDesigner
Outline: Installation of CellDesigner 4.3 Software requirement Download & Installation of CellDesigner On Windows OS Adding a protein species
Outline: Getting Started with CellDesigner General view of CellDesigner The Menu & Tool Bar Components, Species & Reaction Creating a simple network: Name & Size o..
Outline: To change color, shape and width of a Reaction line Add Anchor points to a Reaction line Align Components Show/hide Reaction ids Adding notes to Components Editing Protein Ed..
Outline: System requirement Download & Install CellDesigner On Linux OS How to find out the OS type of the computer Significance of Select mode, Grid Snap and Grid Visible Crea..
Outline: 1. Open an already saved .xml file 2. Change the following in a Compartment- Size, shape, color and thickness of the border 3. Create multiple files in CellDesigner 4. Learn ..
Outline: Use Macros Move all components to another side of the draw area Align a Reaction line Extend a Reaction line Build a Process diagram using CellDesigner